International Journals
International Conferences
Books & Book Chapters
Reprints, Reports, Misc.
Patents
International Conferences
  1. Y. Kim, J.-M. Yang, K.-H. Cho, "Identifying synergistic control targets of a biological network based on a merged state transition map", Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Virginia, USA, Aug. 6-12, 2017.


  2. H. Chang, B. Lee, U. Kang, K.-H. Cho, "A study on frequency-dependent state transition patterns in brain networks using energy landscape analysis", Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Virginia, USA, Aug. 6-12, 2017.


  3. Y. Han, J. Kim and K.-H. Cho, "Predicting anticancer drug responses using deep learning based on cancer cell line gene expression profiles and drug molecular fingerprints", Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Virginia, USA, Aug. 6-12, 2017.


  4. U. Kang, B. Lee, H. Chang, K.-H. Cho, "Increasing the network communicability of a damaged brain network for rehabilitation", Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Virginia, USA, Aug. 6-12, 2017.


  5. S.-Y. Jang, J. Lee, Y. Kim, D. Kim, and K.-H. Cho, "Predicting the perturbation effects in biological networks based on linear system approximation modeling", Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Virginia, USA, Aug. 6-12, 2017.


  6. S.-M. Park, C. Y. Hwang, D. Lee, J.-Y. Gong, and K.-H. Cho, "Cell-type specific optimized therapy for colorectal cancer based on dynamical analysis of variant network models", Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Virginia, USA, Aug. 6-12, 2017.


  7. B. Lee, U. Kang, H. Chang, K.-H. Cho, "The minimum dominating sets in a brain network critically determine the efficiency of local communication of the network", Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Virginia, USA, Aug. 6-12, 2017.


  8. J.-R. Gong, D. Shin, J. Lee, and K.-H. Cho, "Analysis of phenotypic network changes along with the sequential occurrence of driver mutations during colorectal tumorigenesis", Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Virginia, USA, Aug. 6-12, 2017.


  9. J.-M. Yang, K.-H. Cho, "Control of a class of large-scale Boolean networks for biological systems using constant inputs", Proc. 6th IFAC Conference on Foundations of Systems Biology in Engineering, Magdeburg, Germany, Oct. 9-12, 2016.


  10. M. Choi, K.-H. Cho, "Systematic approach for prediction of drug efficacy and potency based on attractor landscape analysis of p53 network", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  11. J.-I. Joo, M. Choi, K.-H. Cho, "Attractor landscape analysis of retina photoreceptor differentiation", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  12. H.-Y. Lee, H.-S. Lee, K.-H. Cho, "Dynamical analysis of non-genetic heterogeneity of cancer cells and its influence on drug responses", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  13. H.-S. Lee, S. Lee, K.-H. Cho, "Systems analysis of drug resistance to dual PI3K/mTOR inhibition in colorectal cancer cells", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  14. B. Lee, D. Shin, K.-H. Cho, "The regulation principle underlying interneuron circuits for frequency modulation of neuronal oscillations", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  15. S.-M. Park, K.-H. Cho, "Optimized cancer therapy by applying the optimal control of a molecular regulatory network", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  16. S.-Y. Jang, S.-M. Park, K.-H. Cho, "Feedback loops and controllability in biomolecular regulatory networks", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  17. Y. Kim, K.-H. Cho, "A mechanism analysis of colon cancer reversion based on Boolean network modeling", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  18. J. Kim, J.-I. Joo, K.-H. Cho, "Quantifying tumor heterogeneity in terms of attractors", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  19. Y.-H. Han, K.-H. Cho, "Systematic prediction of drug responses based on principal component analysis of gene expression profiles from Cancer Cell Line Encyclopedia", Proc. 17th Int. Conf. on Systems Biology (ICSB2016), Barcelona, Spain, Sep. 16-20, 2016.


  20. Y. Kim, K.-H. Cho, "A Novel Pipeline Method for Dynamical Boolean Network Construction and Analysis from Experimental Data", Proc. 16th Int. Conf. on Systems Biology (ICSB2015), Singapore, Nov. 23-26, 2015.


  21. S.-M. Park, K.-H. Cho, "The selective communication among neuronal groupsas an emergent behavior of network motifs", Proc. 16th Int. Conf. on Systems Biology (ICSB2015), Singapore, Nov. 23-26, 2015.


  22. J.-H. Kang, H.-S. Lee, Y.-W. Kang, S. M. Kim, J. Y. Huh, K. Choi, K.-H. Cho, "Systems analysis of the cardiac signaling network reveals essential links related to the pathologic phenotypes of a cardiomyocyte", Proc. 16th Int. Conf. on Systems Biology (ICSB2015), Singapore, Nov. 23-26, 2015.


  23. H.-Y. Lee, H. Alsafar, K.-H. Cho, "Predicting the adverse effect of antidiabetic drugs on cancer development", Proc. 16th Int. Conf. on Systems Biology (ICSB2015), Singapore, Nov. 23-26, 2015.


  24. S. Ham, K.-H. Cho, "A conceptual systems biological approach to identify an optimal sequential drug treatment strategy against cancer", 2015 CSHL Systems Biology: Networks, New York, USA, Mar. 17-21, 2015.


  25. D. Kim, K.-H. Cho, "Systems analysis of the relationship between genotype and phenotype based on gene expression profiles of yeast", 2015 CSHL Systems Biology: Networks, New York, USA, Mar. 17-21, 2015.


  26. D. Shin, J. Lee, K.-H. Cho, "The giant cluster of somatic mutations that emerges during critical transition in colorectal tumorigenesis", 2015 CSHL Systems Biology: Networks, New York, USA, Mar. 17-21, 2015.


  27. M. Choi, K.-H. Cho, "Optimal combined anti-cancer therapy that can overcome cell-type specific drug resistance of breast cancer", 2015 AACR Computational and systems biology of cancer, San Francisco, USA, Feb. 8-11, 2015.


  28. S.-H. Cho, S.-M. Park, H.-S. Lee, H.-Y. Lee, K.-H. Cho, "The reverse control of colorectal cancer tumorigenesisbased on Boolean network modeling of human signaling network", 2015 AACR Computational and systems biology of cancer, San Francisco, USA, Feb. 8-11, 2015.


  29. H.-Y. Lee, K.-H. Cho, "The development of an individualized Boolean network model for targeted anti-cancer therapy of glioblastoma", 2015 AACR Computational and systems biology of cancer, San Francisco, USA, Feb. 8-11, 2015.


  30. J. Lee, J. I. Joo, S. Ham, K.-H. Cho, "Systems biological identification of optimal drug targets for combination therapy of non-small cell lung cancer", 2015 AACR Computational and systems biology of cancer, San Francisco, USA, Feb. 8-11, 2015.


  31. S.-M. Park, K.-H. Cho, "The alteration of input-output relationship in the cell signallingnetwork during tumorigenesis", 2015 AACR Computational and systems biology of cancer, San Francisco, USA, Feb. 8-11, 2015.


  32. C.-Y. Hwang, H.-S. Lee, K.-H. Cho, "The MLK3-mediated positive feedback loop is a crucial factor in cellular responses to Reactive Oxygen Species", 2014 ASCB/IFCB Meeting, Philadelphia, USA, Dec. 6-10, 2014.


  33. M. Choi, K.-H. Cho, "Systematic prediction of drug response for a large panel of cancer cell lines based on attractor landscape analysis of p53 network", Proc. 15th Int. Conf. on Systems Biology (ICSB2014), Melbourne, Australia, Sep. 14-18, 2014.


  34. J.-I. Joo, M. Choi, K.-H. Cho, "Attractor landscape analysis of retina photoreceptor differentiation", Proc. 15th Int. Conf. on Systems Biology (ICSB2014), Melbourne, Australia, Sep. 14-18, 2014.


  35. J. Lee, K.-H. Cho, "Systems biological identification of optimal drug targets for combination therapy with IAP antagonists", Proc. 15th Int. Conf. on Systems Biology (ICSB2014), Melbourne, Australia, Sep. 14-18, 2014.


  36. D. Lee, K.-H. Cho, "Identifying the substrates of b-TRCP using sequence motif search and network analysis", Proc. 15th Int. Conf. on Systems Biology (ICSB2014), Melbourne, Australia, Sep. 14-18, 2014.


  37. S.-M. Park, K.-H. Cho, "A design principle underlying the information processing of human signaling network", Proc. 15th Int. Conf. on Systems Biology (ICSB2014), Melbourne, Australia, Sep. 14-18, 2014.


  38. D. Kim and K.-H. Cho, "Systems analysis of the trade-off mechanism between fitness and longevity in yeast", Proc. 15th Int. Conf. on Systems Biology (ICSB2014), Melbourne, Australia, Sep. 14-18, 2014.


  39. J. H. Kang, H.-S. Lee, K.-H. Cho, "A network-based approach to control the calcium cycling in cardiomyocytes", Proc. 15th Int. Conf. on Systems Biology (ICSB2014), Melbourne, Australia, Sep. 14-18, 2014.


  40. M. Choi, J.-I. Joo, K.-H. Cho, "Optimal combined anti-cancer therapy overcoming cell-type specific drug resistance based on attractor landscape analysis of p53 network", Proc. 14th Int. Conf. on Systems Biology(ICSB2013), Copenhagen, Denmark, Aug. 30-Sep. 3, 2013.


  41. D. Lee, K.-H. Cho, "The paradoxical roles of ubiquitin-proteasome system in transcription and degradation can serve as interlocked safety devices", Proc. 14th Int. Conf. on Systems Biology(ICSB2013), Copenhagen, Denmark, Aug. 30-Sep. 3, 2013.


  42. S.-H. Cho, K.-H. Cho, "The evolutionary design principle of network motifs in neural networks of various species", Proc. 14th Int. Conf. on Systems Biology(ICSB2013), Copenhagen, Denmark, Aug. 30-Sep. 3, 2013.


  43. H.-Y. Lee, D. Kim, K.-H. Cho, "Identifying the commonly preserved protein interaction subnetwork across different species", Proc. 14th Int. Conf. on Systems Biology(ICSB2013), Copenhagen, Denmark, Aug. 30-Sep. 3, 2013.


  44. J.H. Kang, H.-S., "A network-based approach to understand the control mechanism of calcium regulatory machinery in cardiomyocyte", Proc. 14th Int. Conf. on Systems Biology(ICSB2013), Copenhagen, Denmark, Aug. 30-Sep. 3, 2013.


  45. S.-M. Park, K.-H. Cho, "The information processing kernel of human signaling network", Proc. 14th Int. Conf. on Systems Biology(ICSB2013), Copenhagen, Denmark, Aug. 30-Sep. 3, 2013.


  46. J.-H. Song, M.-J. Kim, H.-Y. Lee, K.-H. Cho, "A hidden negative feedback-mediated mechanism responsible for the unexpected progression effect of anti-cancer drug treatment", Proc. 14th Int. Conf. on Systems Biology(ICSB2013), Copenhagen, Denmark, Aug. 30-Sep. 3, 2013.


  47. D. Kim, K.-H. Cho, "The universal molecular basis of individual phenotypic differences", The 1st Korean-American Kavli Frontiers of Science Symposium, Irvine, USA, Aug. 12-14, 2013.


  48. H.-S. Lee, M.-J. Goh, J. Kim, T. Choi, H.-K. Lee, Y. J. Na, K.-H. Cho, "Systems biological identification of effective and safe molecular targets for skin lightening", International Investigative Dermatology, Edinburgh, Scotland, May 8-11, 2013.


  49. K.-H. Cho, "The core processing module of cellular computing networks", Proc. Frontiers of Natural Computing, York, U.K., p. 1, Sep. 10-12, 2012.


  50. H.-S. Lee, C. Hwang, S.-Y. Shin, K.-S. Kwon, K.-H. Cho, "Identifying the molecular switching circuit that coordinates ROS-mediated cell-fate decision", Proc. 13th Int. Conf. on Systems Biology(ICSB2012), Toronto, Canada, Aug. 19-23, 2012.


  51. S.-M. Park, J. Kim, K.-H. Cho, "Controllability kernel of biological networks", Proc. 13th Int. Conf. on Systems Biology(ICSB2012), Toronto, Canada, Aug. 19-23, 2012.


  52. T.-J. Choi, D. Kim, H.-Y. Lee, K.-H. Cho, "Comparing inter- and intra-species evolutionary traits to unravel the principle of network evolution", Proc. 13th Int. Conf. on Systems Biology(ICSB2012), Toronto, Canada, Aug. 19-23, 2012.


  53. H.-Y. Lee, D. Kim, T.-J. Choi, K.-H. Cho, "Identifying an evolutionarily conserved core regulatory network across different species", Proc. 13th Int. Conf. on Systems Biology(ICSB2012), Toronto, Canada, Aug. 19-23, 2012.


  54. J.-I. Joo, M. Choi, K.-H. Cho, "Defining and predicting a pre-cancer cellular state based on attractor landscape analysis", Proc. 13th Int. Conf. on Systems Biology(ICSB2012), Toronto, Canada, Aug. 19-23, 2012.


  55. M. Choi, J.-I. Joo, K.-H. Cho, "A system-level control of cell fate during photoreceptor development based on state space analysis", Proc. 13th Int. Conf. on Systems Biology(ICSB2012), Toronto, Canada, Aug. 19-23, 2012.


  56. D. Lee, K.-H. Cho, "Design Principles of Integrating Transcription and Ubiquitination Machineries", Proc. 13th Int. Conf. on Systems Biology(ICSB2012), Toronto, Canada, Aug. 19-23, 2012.


  57. K.-H. Cho, "Investigations into Rho-GTPase Signaling Network: A Systems Approach", UCD-NUIG Workshop, Galway, Ireland, Mar. 29, 2012.


  58. Y.-B. Zhao, H.-S. Lee, J. Kim and K.-H. Cho, "Low-degree nodes having strong local effects but weak global effects could be drug targets", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  59. T.-H. Kim, T. Kim, S.-Y. Shin, D. H. Kim and K.-H. Cho, "The Coordination Principle of Differential Cellular Responses in the Cardiac Hypertrophy Signaling Network", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  60. J.-H. Song, and K.-H. Cho, "The Functional Role of Wnt/E-cadherin Signaling Pathway in the Regulation of Cellular Adheison", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  61. D. Shin, S.-M. Park, S. Hong, and K.-H. Cho, "Neuronal Feedback Circuit as a Frequency Tuner for Selective Communication", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  62. J.-K. Won, H. W. Yang, S.-Y. Shin, J. H. Lee, W. D. Heo, K.-H. Cho, "De novo Resistance to MEK Inhibitor is Caused by PI3K-Akt Pathway Activation Involving the Adaptor Protein GAB1", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  63. H. Lee and K.-H. Cho, "A de novo System-Level Investigation into the Development of Colorectal Cancer Based on State Space Analysis", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  64. J. Kim, J. Kim, K. Cho, "Decomposition of human signaling network into two modules: evolvable core and robust neighbor", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  65. D. Kim, K. Cho, "Identifying the Regulatory Variations Among Individuals: a Genome-wide Perspective", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  66. S. Cho, J. Jang, K. Jhung, D. Shin, J. Park, S. An, K.-H. Cho, "Alteration of the Functional Connectivity Network for Working Memory in Ultra-high Risk for Psychosis and First-episode Schizophrenia", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  67. S. Park, S. Shin, S. Cho, K.-H. Cho, "A New Network Motif that Decodes the Gradient of Input Stimulation", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  68. M. Choi, S. Jung, K.-H. Cho, "Analysis and Control of the State Transition Dynamics in the p53 Regulatory Network", Proc. 12th Int. Conf. on Systems Biology (ICSB2011), Heidelberg/Mannheim, Germany, Aug. 28-Sep.1, 2011.


  69. K. U. Jhung, J.-H. Jang, J. Y. Park, J. Park, E. Lee, K.-H. Cho, and S. K. An, "Alterations of functional connectivity related to working memory in ultra-high risk for psychosis and first-episode schizophrenia : an EEG study", The 2nd Asian Congress on Schizophrenia Research, Seoul, Korea, P080, Feb.11-12, 2011.


  70. J.-H. Jang, K. Jhung, D. Shin, J. Y. Park, S. K. An, and K.-H. Cho, "Characterization of ultra-high risk for psychosis based on topological properties of neural networks", The 2nd Asian Congress on Schizophrenia Research, Seoul, Korea, P106, Feb.11-12, 2011.


  71. K. Noh, Y. Koh, D. Shin, K. S. Shin, J. S. Kim, J.-S. Choi, J. H. Jang, C. K. Chung, J. S. Kwon, and K.-H. Cho, "Alterations of Cross Frequency Coupling and Feedback Structure in Schizophrenia Patients under Resting Condition: An MEG Study", The 2nd Asian Congress on Schizophrenia Research, Seoul, Korea, P108, Feb.11-12, 2011.


  72. K.-H. Cho, M. Choi, T.-H. Kim, and S. H. Jung, "A Coordination of Cell Fate Decisions by p53 Dynamics through Interlinked Positive and Negative Feedbacks", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.387, Oct.11-14, 2010.


  73. K.-H. Cho, T.-H. Kim, T. Kim, S.-Y. Shin, and D. H. Kim, "A System-Level Investigation into the Regulatory Mechanism of Cardiac Hypertrophy Based on a Large-Scale Signaling Network Model", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.395, Oct.11-14, 2010.


  74. K.-H. Cho, S.-Y. Shin, H. W. Yang, J.-R. Kim, and W. D. Heo, "A systems biological investigation into the dual roles of RCAN1 in the calcineurin-NFAT signaling network", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.379, Oct.11-14, 2010.


  75. J.-R. Kim, D. Shin, S. H. Jung, P. Heslop-Harrison, and K.-H. Cho, "Design Principle of Synchronized Oscillations in Biological Networks", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.373, Oct.11-14, 2010.


  76. K.-H. Cho, M.-S. Kim, and J.-R. Kim, "Dynamical Roles of Time-Specific Network Motifs in the Developmental Gene Regulatory Network of Drosophila melanogaster", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P02.462, Oct.11-14, 2010.


  77. K.-H. Cho, S.-H. Cho, and J. Kim, "Identification of Marker Genes for Alzheimer's Disease from a Systems Biology Approach", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.427, Oct.11-14, 2010.


  78. K.-H. Cho, J. H. Lee, and S.-Y. Shin, "Interlinked Coupled Positive Feedback Loops Mediated by RKIP Coordinate the Dynamic Behavior of Extracellular Signal-Regulated Kinases", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.377, Oct.11-14, 2010.


  79. K.-H. Cho, T.-H. Kim, J. Kim, and P. Heslop-Harrison, "Kingdom-Specific Network Motifs for Evolutionary Design Principles", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.391, Oct.11-14, 2010.


  80. K.-H. Cho, S. U. Chaudhary, J. E. Sormark, W.-J. Kyung, and S.-Y. Shin, "Multi-scale Modeling and Game-Theoretic Analysis of Mitochondrial Process Elucidates the Hidden Mechanism of Warburg Effect in Tumorigenesis", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P02.614, Oct.11-14, 2010.


  81. D. Shin, S. Park, S. Hong, and K.-H. Cho, "Neuronal Communication by Resonance and Synchronized Oscillations: Systems Biological Perspectives", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, PS6.5, Oct.11-14, 2010.


  82. K.-H. Cho, H.-B. Kim, and S. H. Jung, "Self-Organization Facilitates the Evolution of Biological Networks", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.383, Oct.11-14, 2010.


  83. K.-H. Cho, J.-K. Won, S.-Y. Shin, J.-W. Kang, and J.-R. Kim, "The Cross-Regulation between Ras-Raf-MEK-ERK and PI3K-Akt Pathways Determines the Sensitivity to MEK Inhibitor", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, PS8.7, Oct.11-14, 2010.


  84. K.-H. Cho, D. Lee, and D. Shin, "The Crosstalk Between NF-kappaB and Wnt Signaling Pathways Mediated by SCF(β-TrCP) Ubiquitin Ligase Complexes", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.409, Oct.11-14, 2010.


  85. K.-H. Cho, J.-H. Song, and J.-R. Kim, "The Hysteresis Induced by Mutual Inhibitions between E-cadherin and β-catenin Plays a Key Role in Colonic Tissue Organization", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.389, Oct.11-14, 2010.


  86. K.-H. Cho, D. Kim, and M.-S. Kim, "The Properties of Stress-Responsive Core Regulatory Network in Saccharomyces cerevisiae", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.355, Oct.11-14, 2010.


  87. D. H. Kim, T. Kim, T.-H. Kim, S.-Y. Shin, K.-H. Cho, "Systems Biological Study to Distinguish Physiological and Pathological Cardiac Hypertrophy Signaling Mechanisms", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P01.441, Oct.11-14, .


  88. K.-S. Kwon, K.-H. Cho, C. Y. Hwang, K. S. Kim, J. M. Yang, "A Model for Biologic Systems Representing ROS-mediated Fate Decision in Cancer Cells", Proc. 11th Int. Conf. on Systems Biology (ICSB2010), Edinburgh, Scotland, UK, P02.70, Oct.11-14, 2010.


  89. J.-R. Kim, J. Kim, Y.-K. Kwon, H.-Y. Lee, and K.-H. Cho, "The kernel of a complex biomolecular interaction network", Proc. International Conference on Systems Biology of Stem Cells, Irvine, California, USA, p. 14, May 24-25, 2010.


  90. M. Choi, T.-H. Kim, S. H. Jung, and K.-H. Cho, "An investigation into the role of multiple feedback loops in the p53 regulation network based on Boolean network modeling", Proc. International Conference on Systems Biology of Stem Cells, Irvine, California, USA, p. 15, May 24-25, 2010.


  91. K.-H. Cho, "Topology, Dynamics, and Emergent Properties in Biological Interaction Networks", Proc. Computational Systems Biology Workshop, Shanghai, China, Sep., 2009.


  92. K.-H. Cho, "Exploring the Design Principle of Emergent Properties in Biological Systems", Proc. 3rd Int. Symposium on Optimization and Systems Biology (OSB2009), Zhangjiajie, China, pp. 485-488, Sep., 2009.


  93. M.-S. Kim, J.-R. Kim, and K.-H. Cho, "A new concept of dynamic network motif in time-varying molecular regulatory networks", Proc. 10th Int. Conf. on Systems Biology (ICSB2009), Stanford, California, U.S.A., Poster 1.008, Sep., 2009.


  94. U. W. Liebal, J.-R. Kim, O. Wolkenhauer, and K.-H. Cho, "Dynamic behavior determines the design strategy of metabolic regulation networks", Proc. 10th Int. Conf. on Systems Biology (ICSB2009), Stanford, California, U.S.A., Poster 1.019, Sep., 2009.


  95. S.-H. Cho, J. Kim, and K.-H. Cho, "Investigations into the time-varying gene regulatory network of embryonic stem cell developments", Proc. 10th Int. Conf. on Systems Biology (ICSB2009), Stanford, California, U.S.A., Poster 1.027, Sep., 2009.


  96. M.-G. Shin, D. Kim, and K.-H. Cho, "The dynamical regulatory role of synthetic lethal paralogous gene pairs", Proc. 10th Int. Conf. on Systems Biology (ICSB2009), Stanford, California, U.S.A., Poster 1.028, Sep., 2009.


  97. D. Kim, M.-S. Kim, J.-R. Kim, and K.-H. Cho, "Identification of condition-specific functional modules in the signaling network of Saccharomyces cerevisiae", Proc. 10th Int. Conf. on Systems Biology (ICSB2009), Stanford, California, U.S.A., Poster 2.018, Sep., 2009.


  98. S.-Y. Shin, T.-H. Kim, S.-M. Choo, O. Rath, F. Fee, B. McFerran, W. Kolch, and K.-H. Cho, "A system-level investigation into the feedback regulatory mechanisms of Ras-Raf-MEK-ERK signal transduction pathway", Proc. 10th Int. Conf. on Systems Biology (ICSB2009), Stanford, California, U.S.A., Poster 2.019, Sep., 2009.


  99. J.-R. Kim, S.-M. Choo, and K.-H. Cho, "Identification of gene regulatory networks with time delays", Proc. 10th Int. Conf. on Systems Biology (ICSB2009), Stanford, California, U.S.A., Poster 3.018, Sep., 2009.


  100. J. Kim, M. Choi, and K.-H. Cho, "The bi-phasic regulatory role of hub transcription factors in the gene regulatory network of HepG2 cells", Proc. 10th Int. Conf. on Systems Biology (ICSB2009), Stanford, California, U.S.A., Poster 3.023, Sep., 2009.


  101. J. Lee, S.-Y. Shin, and K.-H. Cho, "A system-level investigation into the functional role of RKIP in the ERK and NF-kB signaling networks", Proc. 10th Int. Conf. on Systems Biology (ICSB2009), Stanford, California, U.S.A., Poster 3.026, Sep., 2009.


  102. K.-H. Cho, "Topology and dynamics of complex signaling networks", Proc. 9th Int. Conf. on Integrating Physics, Chemistry, Mathematics and Biology to Understand Living Systems (IPCMB 2008), Bose Institute, Kolkata, India, p. 30, Dec., 2008.


  103. T. Millat, S. N. Srenath, R. P. Soebiyanto, J. Avva, K.-H. Cho, and O. Wolkenhauer, "The role of dynamic stimulation pattern in the analysis of bistable intracellular networks", Proc. 9th Int. Conf. on Systems Biology (ICSB2008), Gothenburg, Sweden, DS2-1-38, p. 100, Aug., 2008.


  104. S.-Y. Shin, K. W. Lee, S.-M. Choo, K.-S. Kwon, and K.-H. Cho, "The variable regulatory mechanism of the calcineurin/NFAT signaling pathway depending on stimulation strength", Proc. 9th Int. Conf. on Systems Biology (ICSB2008), Gothenburg, Sweden, DS2-1-48, p. 102, Aug., 2008.


  105. T.-H. Kim, S. Baek, S. H. Jung, and K.-H. Cho, "A system-level study on the dynamical characteristics of E. coli swarming", Proc. 9th Int. Conf. on Systems Biology (ICSB2008), Gothenburg, Sweden, DS2-2-22, p. 128, Aug., 2008.


  106. D. Kim, Y.-K. Kwon, and K.-H. Cho, "Multiple dynamic characteristics of incoherent feed-forward loops", Proc. 9th Int. Conf. on Systems Biology (ICSB2008), Gothenburg, Sweden, DS2-2-62, p. 138, Aug., 2008.


  107. J.-R. Kim and K.-H. Cho, "The role of coupled positive feedback loops and hysteresis in biological networks", Proc. 9th Int. Conf. on Systems Biology (ICSB2008), Gothenburg, Sweden, DS2-2-73, p. 141, Aug., 2008.


  108. D. Shin, H.-W. Lee, and K.-H. Cho, "Cross-talks between NF-κB and Wnt/β-catenin pathways and their implications in the regulation of tumorigenesis", Proc. 9th Int. Conf. on Systems Biology (ICSB2008), Gothenburg, Sweden, DS2-2-131, p. 156, Aug., 2008.


  109. J. Kim, T.-G. Kim, S. H. Jung, J.-R. Kim, T. Park, P. Heslop-Harrison, and K.-H. Cho, "Design principles of gene regulatory networks governing the differentiation processes", Proc. 9th Int. Conf. on Systems Biology (ICSB2008), Gothenburg, Sweden, OS-12,?p. 203, Aug., 2008.


  110. C.-Y. Dong, K.-H. Cho, and T.-W. Yoon, "Identification of intra-cellular feedback loops by intermittent step perturbation method", Proc. 17th IFAC World Congress (IFAC 2008), Seoul, Korea, pp. 289-294, Jul., 2008.


  111. S. H. Jung and K.-H. Cho, "Reconstruction of gene regulatory networks by neuro-fuzzy inference systems", Proc. Frontiers in the Convergence of Bioscience and Information Technologies 2007 (FBIT2007), Jeju Island, Korea, p. 16, Oct., 2007.


  112. D. Shin and K.-H. Cho, "Modulation of NF-kappaB oscillatory patterns mediated by beta-TrCP", Proc. 8th Int. Conf. on Systems Biology (ICSB2007), Long Beach, California, U.S.A., F10,?p. 43, Oct., 2007.


  113. S.-Y. Shin, S.-M. Choo, W. Kolch, and K.-H. Cho, "System-level investigations into the functional role of RKIP in the Ras-Raf-MEK-ERK signal transduction pathway", Proc. 8th Int. Conf. on Systems Biology (ICSB2007), Long Beach, California, U.S.A., F36,?p. 48, Oct., 2007.


  114. J. Kim, J. Gim, S.-W. Lee, M. Choi, and K.-H. Cho, "In Silico TCDD Toxicity Evaluation System", Proc. 8th Int. Conf. on Systems Biology (ICSB2007), Long Beach, California, U.S.A., G16,?p. 57, Oct., 2007.


  115. J.-R. Kim and K.-H. Cho, "Dynamic motifs of cellular networks: Coupled feedback loops", Proc. 8th Int. Conf. on Systems Biology (ICSB2007), Long Beach, California, U.S.A., J17,?p. 86, Oct., 2007.


  116. S.-Y. Shin, W.-S. Bae, T.-H. Kim, S.-M. Choo, and K.-H. Cho, "Dynamical analysis of beta-adrenergic signaling pathways in cardiac myocytes", Proc. 7th Int. Conf. on Systems Biology (ICSB2006), Yokohama, Japan, MV02, Oct., 2006.


  117. D. Kim and K.-H. Cho, "Elucidation of the hidden dynamic features in the ERK pathway", Proc. 7th Int. Conf. on Systems Biology (ICSB2006), Yokohama, Japan, BS29, Oct., 2006.


  118. Y. Yoon and K.-H. Cho, "Lag-appended PCA: a new method for inferring the causal relationship between genes from temporal expression profiles", Proc. 7th Int. Conf. on Systems Biology (ICSB2006), Yokohama, Japan, FN30, Oct., 2006.


  119. H.-S. Choi, S.-M. Choo, J.-R. Kim, and K.-H. Cho, "Inference of transcriptional regulatory networks based oninitial mRNA expression profiles and DNA-binding motifs", Proc. 7th Int. Conf. on Systems Biology (ICSB2006), Yokohama, Japan, FN31, Oct., 2006.


  120. T.-H. Kim, S. H. Jung, and K.-H. Cho, "Parameter perturbation analysis of bacterial chemotaxis", Proc. 7th Int. Conf. on Systems Biology (ICSB2006), Yokohama, Japan, FT04, Oct., 2006.


  121. J. Kim, D. G. Bates, I. Postlethwaite, P. Heslop-Harrison, and K.-H. Cho, "Robust identification of biochemical networks from noisy measurements", Proc. 7th Int. Conf. on Systems Biology (ICSB2006), Yokohama, Japan, FT14, Oct., 2006.


  122. J.-R. Kim, H.-S. Choi, J. Kim, D. Kim, Y. Yoon, S.-W. Lee, and K.-H. Cho, "Systems microbiological investigations into the two-component systems in E. coli", Proc. 7th Int. Conf. on Systems Biology (ICSB2006), Yokohama, Japan, OT02, Oct., 2006.


  123. S.-J. Park and K.-H. Cho, "The Existence Conditions of a Supervisor for Timed Discrete Event Systems Under Bounded Communication Delays", Proc. 17th Int. Symp. on Mathematical Theory of Networks and Systems (MTNS2006), Kyoto, Japan, pp. 938-940, Jul., 2006.


  124. K.-H. Cho, "Systems Biology: Investigations into the Hidden Dynamics of Pathways and Networks", Proc. 1st Int. Conf. on Computational Systems Biology (ICCSB2006), Shanghai, China, p. 6, Jul., 2006.


  125. K.-H. Cho, S.-Y. Shin, S. Baek, and S.-M. Choo, "Hierarchical modeling of the cardiac calcium signaling system for an integrated approach to analyze the complex dynamics and to identify a new therapeutic target for heart diseases", Proc. 6th Int. Conf. on Systems Biology (ICSB2005), Boston, U.S.A., p. 118, Oct., 2005.


  126. D. H. Kim, S.-H. Rho, S.-E. Hong, C. H. Cho, S. H. Eom, Z. Y. Park, K.-H. Cho, S.-H. Woo, Y.-I. Yeom, K.-S. Kwon, Y. S. Kim, and Y. S. Yoo, "Calcium signaling systems in mouse heart (the Korean Systems Biology Initiative, KoSBI)", Proc. 6th Int. Conf. on Systems Biology (ICSB2005), Boston, U.S.A., p. 194, Oct., 2005.


  127. P. Wellstead, O. Mason, W. T. O'Connor, K.-H. Cho, E. Bullinger, O. Wolkenhauer, and S. Duncan, "Towards a systems understanding of the cerebral motor circuit", Proc. of Foundations of Systems Biology in Engineering (FOSBE2005), Santa Barbara, U.S.A., pp. 185-188, Aug., 2005.


  128. S. W. Shin and K.-H. Cho, "Congestion control of tree-structured multicasting networks based on self-updated RTT for reliable industrial applications", Proc. of 30th Annual Conference of the IEEE Industrial Electronics Society (IECON'04), Busan, Korea, FC7-34, Nov., 2004.


  129. S. W. Shin and K.-H. Cho, "End-to-end rate-based congestion control using EWMA for multicast services in IP based networks", Proc. of 30th Annual Conference of the IEEE Industrial Electronics Society (IECON'04), Busan, Korea, FC7-35, Nov., 2004.


  130. H. Schmidt, E. W. Jacobsen, and K.-H. Cho, "Identification of feedback loops in metabolic pathways", Proc. 5th Int. Conf. on Systems Biology (ICSB2004), Heidelberg, Germany, p. 82, Oct., 2004.


  131. M. Ullah, O. Wolkenhauer, W. Kolch, and K.-H. Cho, "Choosing an appropriate modeling framework: How deterministic are random processes?", Proc. 5th Int. Conf. on Systems Biology (ICSB2004), Heidelberg, Germany, p. 162, Oct., 2004.


  132. K.-H. Cho, S.-Y. Shin, W. Kolch, and O. Wolkenhauer, "Modeling and analysis of two feedback loop dynamics in Ras/Raf-1/MEK/ERK signaling pathway", Proc. 5th Int. Conf. on Systems Biology (ICSB2004), Heidelberg, Germany, p. 168, Oct., 2004.


  133. K.-H. Cho, K. H. Johansson, and O. Wolkenhauer, "A system-theoretic modeling framework for cellular processes", Proc. 5th Int. Conf. on Systems Biology (ICSB2004), Heidelberg, Germany, p. 169, Oct., 2004.


  134. S. H. Jung and K.-H. Cho, "Identification of Gene Interaction Networks Based on Evolutionary Computation", Proc. of 2004 AI, Simulation and Planning (AIS2004), Jeju Island, Korea, pp. 428-439, Oct., 2004.


  135. C. S. Moller, H. Yin, K.-H. Cho, and O. Wolkenhauer, "Modeling gene expression time-series with radial basis function neural networks", Proc. Int. Joint Conference on Neural Networks (IJCNN'04), Budapest, Hungary, IEEE Catalog Number: 04CH37541C, Jul., 2004.


  136. K.-H. Cho, S.-Y. Shin, W. Kolch, and O. Wolkenhauer, "Mathematical modeling of Ras/Raf-1/MEK/ERK signal pathway: Qualitative analysis of the positive feedback mechanism", Proc. 4th Int. Conf. on Systems Biology (ICSB2003), St. Louis, Missouri, U.S.A., pp. 96-97, Nov., 2003.


  137. O. Wolkenhauer, W. Kolch, and K.-H. Cho, "Dynamic Pathway Modelling: From Models to Cells", Proc. of 3rd Workshop on Computation of Biochemical Pathways and Genetic Networks, Heidelberg, Germany, pp. 79-89, Oct., 2003.


  138. C. S. Moller, F. Klawonn, K.-H. Cho, and O. Wolkenhauer, "Fuzzy clustering of short time-series and unevenly distributed sampling points", Proc. 5th Int. Symposium on Intelligent Data Analysis (IDA2003), Berlin, Germany, pp. 330-340, Aug., 2003.


  139. F. Sanchez-Cabo, Z. Trajanoski, K.-H. Cho, and O. Wolkenhauer, "A graphical users interface to normalize microarray data", Proc. 3rd Int. Workshop on Distributed Statistical Computing (DSC2003), Vienna, Austria, Mar., 2003.


  140. K.-H. Cho, J.-H. Cha, and O. Wolkenhauer, "How to synthesize an optimized genetic λ-switch system? A system-theoretic approach based on SQP", Proc. 1st Int. Workshop on Computational Methods in Systems Biology (CMSB2003), Rovereto, Italy, p. 170, Feb., 2003.


  141. K.-H. Cho, S.-Y. Shin, H.-W. Lee, and O. Wolkenhauer, "Simulation study of the TNFα mediated NFκB signaling pathway", Proc. 1st Int. Workshop on Computational Methods in Systems Biology (CMSB2003), Rovereto, Italy, p. 171, Feb., 2003.


  142. K.-H. Cho, J.-H. Cha, and O. Wolkenhauer, "Optimization of genetic switching systems based on SQP: A synthetic λ-switch system", Proc. 3rd Int. Conf. on Systems Biology (ICSB2002), Stockholm, Sweden, p. 86, Dec., 2002.


  143. K.-H. Cho, S.-Y. Shin, H.-W. Lee, and O. Wolkenhauer, "Investigations into the analysis and modeling of? the TNFα mediated NFκB signaling pathway", Proc. 3rd Int. Conf. on Systems Biology (ICSB2002), Stockholm, Sweden, p. 87, Dec., 2002.


  144. S.-J. Park, K.-H. Cho, and J.-T. Lim, "Supervisor for real-time nondeterministic discrete event systems under bounded time constraints", Proc. Int. Conf. on Control, Automation, and Systems (ICCAS2001), Cheju, Korea, pp. 809-812, Oct., 2001.


  145. K.-H. Cho, "Robust supervisory control of communication networks", Proc. 5th Korea-Russia Int. Symp. on Science and Technology, Tomsk, Russia, Vol. 1, pp. 46-47, Jun., 2001.


  146. S.-J. Park, K.-H. Cho, and J.-T. Lim, "Control of real-time discrete event systems under bounded time requirements: problem formulation and supervisor existence", Proc. IASTED Int. Conf. on Control and Applications, Banff, Alberta, Canada, pp. 315-318, Jun., 2001.


  147. S.-H. Lee and K.-H. Cho, "Congestion control of high-speed Gigabit-Ethernet networks for industrial applications", Proc. IEEE Int. Symp. on Industrial Electronics, Pusan, Korea, Vol. 1, pp. 260-265, Jun., 2001.


  148. S.-W. Shin and K.-H. Cho, "A new consolidation algorithm in point-to-multipoint ABR service of ATM networks for industrial applications", Proc. IEEE Int. Symp. on Industrial Electronics, Pusan, Korea, Vol. 1, pp. 386-388, Jun., 2001.


  149. B.-S. Kang and K.-H. Cho, "Design of PLCs for automated industrial systems based on discrete event models", Proc. IEEE Int. Symp. on Industrial Electronics, Pusan, Korea, Vol. 3, pp. 1431-1434, Jun., 2001.


  150. K.-H. Cho and J.-T. Lim, "Fault monitoring and supervisory control of cascaded manufacturing processes", Proc. SPIE International Symposium on Intelligent Systems and Advanced Manufacturing: Intelligent Systems in Design and Manufacturing III, Boston, Massachusetts, U.S.A., Vol. 4192, pp. 11-15, Nov., 2000.


  151. B.-H. Kim, K.-H. Cho, and K.-S. Park, "Analysis and feedback control of LonWorks-based network systems for automated manufacturing", Proc. IEEE Conference on Systems, Man, and Cybernetics, Nashville, Tennessee, U.S.A., pp. 3405-3409, Oct., 2000.


  152. K.-H. Cho, B.-H. Kim, and K.-S. Park, "Rate-Based Traffic Control of Industrial Networks Employing LonWorks", Proc. Int. Technical Conf. on Circuits/Systems, Computers and Communications (ITC-CSCC'2000), Pusan, Korea, Vol. 1, pp. 77-79, Jul., 2000.


  153. S.-H. Lee and K.-H. Cho, "End-to-end congestion control of high-speed Gigabit-Ethernet networks based on Smith's principle", Proc. Int. Technical Conf. on Circuits/Systems, Computers and Communications (ITC-CSCC'2000), Pusan, Korea, Vol. 1, pp. 101-104, Jul., 2000.


  154. K.-H. Cho and J.-T. Lim, "Multiagent supervisory control of serial production systems for complementary fault-tolerance", Proc. IFAC/IFIP/IEEE Conf. on Management & Control of Production & Logistics, Grenoble, France, pp. M4.7-M4.12, Jul., 2000.


  155. K.-H. Cho, "A study on fault-tolerant control and operation of serial production systems", Proc. 4th Korea-Russia Int. Symp. on Science and Technology, Ulsan, Korea, Vol. 2, pp. 175-180, Jun., 2000.


  156. S.-H. Lee and K.-H. Cho, "Congestion control for virtual-connection using a Smith predictor in high-speed Gigabit-Ethernet networks", Proc. 4th Korea-Russia Int. Symp. on Science and Technology, Ulsan, Korea, Vol. 2, pp. 187-193, Jun., 2000.


  157. B.-H. Kim, K.-H. Cho, and K.-S. Park, "Towards LonWorks technology and its application to automation", Proc. 4th Korea-Russia Int. Symp. on Science and Technology, Ulsan, Korea, Vol. 2, pp. 197-202, Jun., 2000.


  158. K.-H. Cho and J.-T. Lim, "Robust supervisory control of discrete event systems and its application to an assembly robotic cell", Proc. 4th International Conference on Mechatronic Technology, Pusan, Korea, pp. 118-123, Oct., 1999.


  159. M.-S. Lee, K.-H. Cho, and J.-T. Lim, "Analysis of critical race conditioned circuit with timed discrete event model", Proc. 4th International Conference on Mechatronic Technology, Pusan, Korea, pp. 538-541, Oct., 1999.


  160. K.-H. Cho and J.-T. Lim, "A practical view of stability analysis in discrete event dynamic systems: a case study on plasma etching system", Proc. IEEE Conference on Systems, Man, and Cybernatics, San Diego, CA, U.S.A., pp. 627-631, Oct., 1998.


  161. K.-H. Cho, S.-J. Park, and J.-T. Lim, "Improved MIQ of work cell by intelligent supervisor", Proc. World Automation Congress, Anchorage, AK, U.S.A., pp. ISSCI-022.1-ISSCI-022.5?, May, 1998.


  162. K.-H. Cho and J.-T. Lim, "On hierarchical optimal supervisory control systems", Proc. 2nd Asian Control Conference, Seoul, Korea, Vol. 1, pp. 413-416, Jul., 1997.


  163. K.-H. Cho and J.-T. Lim, "Failure analysis and diagnosis using discrete event models: theory and case study", Proc. 4th IFAC Workshop on Intelligent Manufacturing Systems, Seoul, Korea, pp. 197-202, Jul., 1997.


  164. S. H. Jung, K.-H. Cho, T. G. Kim, K. H. Park, and J.-T. Lim, "Neural net based PD-plus bang-bang control", Proc. '94 International Conference on Neural Information Processing, Seoul, Korea, Vol. 2, pp. 1335-1340, Oct., 1994.


  165. K.-H. Cho, C.-W. Kim, and J.-T. Lim, "On stability analysis of nonlinear plants with fuzzy logic controllers", Proc. 5th IFSA World Congress, Seoul, Korea, Vol. 2, pp. 1094-1097, Jul., 1993.